Parallel transmit 7T MRI for adult epilepsy pre-surgical evaluation

Publication: Epilepsia

Krzysztof KlodowskiMinghao ZhangJian P. JenDaniel J. ScoffingsRobert MorrisVictoria LupsonFranck MauconduitAurélien MassireVincent GrasNicolas BoulantChristopher T. RodgersThomas E. Cope

20 March 2025

The aim of the study was to implement parallel transmit (pTx) 7T magnetic resonance imaging (MRI) in the pre-surgical evaluation of 3T-negative patients with drug-resistant focal epilepsy, and to compare quality to conventional single transmit (specifically, circularly polarized [CP]) 7T MRI.

We implemented a comparative protocol comprising both pTx and CP 7T MRI in consecutive adult candidates for epilepsy surgery who had negative or equivocal 3T MRI imaging. Here we report the outcomes from the first 31 patients. We acquired pTx and CP T1, T2, fluid-attenuated inversion recovery (FLAIR) and edge-enhancing gradient echo (EDGE) images, all in the same three-dimensional (3D) 0.8 mm isotropic space. Two-dimensional (2D) high-resolution T2 and T2*-weighted sequences were acquired only in CP mode due to current technological limitations. Two neuroradiologists, a neurologist, and a neurosurgeon made independent, blinded quality and preference ratings of pTx vs CP images. Quantitative methods were used to assess signal dropout.

7T revealed previously-unseen structural lesions in nine patients (29%), confirmed 3T-equivocal lesions in four patients (13%), and disproved 3T-equivocal lesions in four patients (13%). Lesions were better visualized on pTx than CP in 57% of cases, and never better visualized on CP. Clinical management was altered by 7T in 18 cases (58%). Nine cases were offered surgical resection and one laser interstitial thermal therapy (LITT). Three cases were removed from the surgical pathway because of bilateral or extensive lesions. Five cases were offered stereo-electroencephalography (sEEG) with better targeting (in three because the 7T lesion was deemed equivocal by the multi-disciplinary team (MDT), and in two because the lesion was extensive). Blinded comparison confirmed significantly better overall quality of pTx FLAIR images (F(2, 184) = 13.7, p = 2.88 × 10−6), whereas pTx MP2RAGE images were subjectively non-inferior and had improved temporal lobe coverage with quantitatively less signal drop-out.

pTx-7T is implementable in a clinical pathway, changed management in 58% of patients where 3T + FDG-PET had not enabled resection, and is superior to single transmit 7T MRI.

Key points

  • We scanned 31 patients with parallel transmit and conventional 7T magnetic resonance imaging (MRI), finding previously-unreported structural lesions in nine patients (29% of cases).
  • In 13% of cases, 7T MRI showed that an equivocal lesion at 3T MRI was likely significant
  • In 13% of cases, 7T MRI showed that an equivocal lesion at 3T MRI could be disregarded.
  • Both qualitative and quantitative quality assessments indicate superiority of pTx images over circularly polarized (CP).
  • Future clinical implementations of 7T MRI for epilepsy should utilize parallel transmit where possible.

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Endoscopic, ultrasound-guided, radiofrequency ablation of aldosterone-producing adenomas (FABULAS): a UK, multicentre, prospective, proof-of-concept trial

Publication: The Lancet

Giulia Argentesi, Xilin Wu, Alexander Ney, Emily Goodchild, Kate Laycock, Yun-Ni Lee, Russell Senanayake, James MacFarlane, Elizabeth Ng, Jessica Kearney, Sam O’Toole, Jackie Salsbury, Nick Carroll, Daniel Gillett, John A Tadross, Alison Marker, Edmund M Godfrey, George Goodchild, Jonathan P Bestwich, Prof Mark Gurnell, Heok Cheow, Prof Stephen P. Periera, Prof William M Drake, Prof Morris J Brown, FABULAS Study Group

07 February 2025

Five percent of all cases of hypertension are caused by the potentially curable cause – unilateral aldosterone-producing adrenal adenomas (APAs). Very often their localisation (via adrenal vein sampling – AVS) and removal (by laparoscopic adrenalectomy) are not appealing to patients. Another, less invasive,  method of detecting and treating APAs has been discovered by the FABULAS Study Group. Over a five year testing period, 44 patients were screened and 28 recruited. The recruited patients  underwent ablations using the new EUS-RFA technology with positive outcomes; complete or partial biochemical cure in 21 participants and complete or partial cure of hypertension in 12 participants after a 3 month period. These findings appear to offer a safe alternative to total adrenalectomy for the treatment of left sided APAs and could potentially cure primary aldosteronism and hypertension when most of the APA is ablated.

Misexpression of inactive genes in whole blood is associated with nearby rare structural variants

Publication: American Journal of Human Genetics

Thomas Vanderstichele, Katie L. Burnham, Niek de Klein, Michael Inouye, Dirk S. Paul, Emma E. Davenport et al

24 July 2024

Gene misexpression is the aberrant transcription of a gene in a context where it is usually inactive. Despite its known pathological consequences in specific rare diseases, we have a limited understanding of its wider prevalence and mechanisms in humans. To address this, we analyzed gene misexpression in 4,568 whole-blood bulk RNA sequencing samples from INTERVAL study blood donors.

We found that while individual misexpression events occur rarely, in aggregate they were found in almost all samples and a third of inactive protein-coding genes. Using 2,821 paired whole-genome and RNA sequencing samples, we identified that misexpression events are enriched in cis for rare structural variants. We established putative mechanisms through which a subset of SVs lead to gene misexpression, including transcriptional readthrough, transcript fusions, and gene inversion. Overall, we develop misexpression as a type of transcriptomic outlier analysis and extend our understanding of the variety of mechanisms by which genetic variants can influence gene expression.

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Quantitative 23Na magnetic resonance imaging in the abdomen at 3 T

Publication: Magnetic Resonance Materials in Physics, Biology and Medicine

Jonathan Birchall, Ines Horvat-Menih, Joshua Kaggie, Arnold Benjamin, Martin Graves, Ian Wilkinson, Ferdia Gallagher, Mary McLean

1 June 2024

Summary

We estimated the sodium content and relaxation of organs within the abdomen of healthy human volunteers using magnetic resonance imaging (MRI). Existing techniques for measuring sodium content are non-specific or require an invasive biopsy. Clinical translation of sodium content monitoring may aid in diagnosis of disease such as cancer, chronic kidney disease and hypertension at earlier stages, and more regular monitoring may help to evaluate efficacy of treatment.

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Using machine learning to model older adult inpatient trajectories from electronic health records data

Publication: ScienceDirect

Maria Herrero-Zazo, Tomas Fitzgerald, Vince Taylor, Helen Street, Afzal N. Chaudhry, John R. Bradley, Ewan Birney, Victoria L. Keevil

20 January 2023


  • Time-series blood test & vital sign data from older inpatients were presented to HMM (Hidden Markov Models)
  • Hidden clinically interpretable states were extracted, linked with diagnoses and death
  • States modeled inpatient trajectories, differentiating risk from admission-discharge
  • The clinical interpretation of HMM states helped explain how ML models organise data

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Evaluation of Dynamic Contrast-Enhanced MRI Measures of Lung Congestion and Endothelial Permeability in Heart Failure: A Prospective Method Validation Study

Publication: JMRI

Joseph Cheriyan, Alexandra Roberts, Caleb Roberts, Martin J. Graves, Ilse Patterson,Rhys A. Slough,Rosemary Schroyer, Disala Fernando, Subramanya Kumar,Sarah Lee, Geoffrey J.M. Parker, Lea Sarov-Blat, Carmel McEniery, Jessica Middlemiss, Dennis Sprecher, Robert L. Janiczek

27 March 2022


Summary

Lung congestion is common in patients with heart failure. Enhanced MRI may be appropriate method for accurate measurement of lung fluid.

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Association of Collagen, Elastin, Glycosaminoglycans, and Macrophages With Tissue Ultimate Material Strength and Stretch in Human Thoracic Aortic Aneurysms: A Uniaxial Tension Study

Publication: J Biomech Eng.

Aziz Tokgoz,  Shuo Wang,  Priya Sastry,  Chang Sun, Nichola L. Figg,  Yuan Huang,  Martin R. Bennett, Sanjay Sinha, Jonathan H. Gillard, Michael P. F. Sutcliffe,  Zhongzhao Teng

25 April 2022


Summary

Fiber structures and pathological features, e.g., inflammation and glycosaminoglycan (GAG) deposition, are the primary determinants of aortic mechanical properties which are associated with the development of an aneurysm. This study is designed to quantify the association of tissue ultimate strength and extensibility with the structural percentage of different components, in particular, GAG, and local fiber orientation.

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3 T: the good, the bad and the ugly

Publication: British Journal of Radiology

Martin John Graves

10 November 2021


Summary

This research reviews the advantages and disadvantages of magnetic resonance imaging at a field strength of 3 tesla in comparison to lower field strengths.

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Federated Learning used for predicting outcomes in SARS-COV-2 patients

Publication: Nature Medicine

Ittai Dayan, Holger R. Roth, Aoxiao Zhong, Ahmed Harouni, Amilcare Gentili, Anas Z. Abidin, Andrew Liu, Anthony Beardsworth Costa, Bradford J. Wood, Chien-Sung Tsai, Chih-Hung Wang, Chun-Nan Hsu, C. K. Lee, Peiying Ruan, Daguang Xu, Dufan Wu, Eddie Huang, Felipe Campos Kitamura, Griffin Lacey, Gustavo César de Antônio Corradi, Gustavo Nino, Hao-Hsin Shin, Hirofumi Obinata, Hui Ren, Jason C. Crane, Jesse Tetreault, Jiahui Guan, John W. Garrett, Joshua D. Kaggie, Jung Gil Park, Keith Dreyer, Krishna Juluru, Kristopher Kersten, Marcio Aloisio Bezerra Cavalcanti Rockenbach, Marius George Linguraru, Masoom A. Haider, Meena AbdelMaseeh, Nicola Rieke, Pablo F. Damasceno, Pedro Mario Cruz e Silva, Pochuan Wang, Sheng Xu, Shuichi Kawano, Sira Sriswasdi, Soo Young Park, Thomas M. Grist, Varun Buch, Watsamon Jantarabenjakul, Weichung Wang, Won Young Tak, Xiang Li, Xihong Lin, Young Joon Kwon, Abood Quraini, Andrew Feng, Andrew N. Priest, Baris Turkbey, Benjamin Glicksberg, Bernardo Bizzo, Byung Seok Kim, Carlos Tor-Díez, Chia-Cheng Lee, Chia-Jung Hsu, Chin Lin, Chiu-Ling Lai, Christopher P. Hess, Colin Compas, Deepeksha Bhatia, Eric K. Oermann, Evan Leibovitz, Hisashi Sasaki, Hitoshi Mori, Isaac Yang, Jae Ho Sohn, Krishna Nand Keshava Murthy, Li-Chen Fu, Matheus Ribeiro Furtado de Mendonça, Mike Fralick, Min Kyu Kang, Mohammad Adil, Natalie Gangai, Peerapon Vateekul, Pierre Elnajjar, Sarah Hickman, Sharmila Majumdar, Shelley L. McLeod, Sheridan Reed, Stefan Gräf, Stephanie Harmon, Tatsuya Kodama, Thanyawee Puthanakit, Tony Mazzulli, Vitor Lima de Lavor, Yothin Rakvongthai, Yu Rim Lee, Yuhong Wen, Fiona J. Gilbert, Mona G. Flores & Quanzheng Li

15 September 2021


Summary

In collaboration with 20 centres across the world, including Harvard and Nvidia, researchers ‘federate’ machine learning to improve the prediction of covid based on chest x-rays. This method allows use to show results without sharing patient data. Read the full press release.

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Dynamic contrast-enhanced MRI of synovitis in knee osteoarthritis: repeatability, discrimination and sensitivity to change in a prospective experimental study

Publication: European Radiology

James W. MacKay, Faezeh Sanaei Nezhad, Tamam Rifai, Joshua D. Kaggie, Josephine H. Naish, Caleb Roberts, Martin J. Graves, John C. Waterton, Robert L. Janiczek, Alexandra R. Roberts, Andrew McCaskie, Fiona J. Gilbert & Geoff J. M. Parker

16 February 2021


Summary

Using a method called dynamic contrast enhancement, where gadolinium contrast is used to detect synovitis (inflammation) in the knee, as a predictor of osteoarthritis. Researchers follow patients for 6-months to detect changes and found it may predict osteoarthritis development.

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